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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 431 occurrences of 272 keywords
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Results
Found 1936 publication records. Showing 1936 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
146 | Minoru Asogawa, Yukiko Fujiwara, Akihiko Konagaya |
A combination of a functional motif model and a structural motif model for a database validation. |
HICSS (5) |
1995 |
DBLP DOI BibTeX RDF |
functional motif model, structural motif model, database validation, leucine zipper motif, twisted alpha helix sequences, DNA binding site, alpha helix region, Swiss Protein database, helical structures, PDB database, neural network, hidden Markov models, HMM, hidden Markov model, database management systems, neural nets, DNA, genetics, biology computing, subsequence |
131 | Chengpeng Bi |
A Monte Carlo EM Algorithm for De Novo Motif Discovery in Biomolecular Sequences. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2009 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, multiple sequence alignment, motif discovery, transcriptional regulation, Expectation maximization (EM) |
118 | Yingren Liu, Karuturi R. Krishna Murthy, Wing-Kin Sung |
ConstrainedMotif: A Periodicity Constraint Based Algorithm to Predict Cell-Cycle Associated Promoter Motifs Using Time-Course Gene Expression Data. |
BIBE |
2005 |
DBLP DOI BibTeX RDF |
Motif prediction, Microarray, Constrained optimization, Cell-cycle |
117 | Jing Zhang 0012, Xi Chen 0001, Ming Li 0001 |
Computing Exact p-Value for Structured Motif. |
CPM |
2007 |
DBLP DOI BibTeX RDF |
Pattern and motif discovery, exact p-value, dynamic programming, structured motif |
115 | Eric P. Xing, Wei Wu 0023, Michael I. Jordan, Richard M. Karp |
LOGOS: a modular Bayesian model for de novo motif detection. |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
111 | Sven Rahmann, Tobias Marschall, Frank Behler, Oliver Kramer 0001 |
Modeling evolutionary fitness for DNA motif discovery. |
GECCO |
2009 |
DBLP DOI BibTeX RDF |
ea, evolutionary algorithms, local search, evolution strategies, computational biology, dna, motif discovery, transcription factor, es |
108 | Chengpeng Bi |
Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm. |
ISBRA |
2007 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, Multiple Sequence Local Alignment, Motif Discovery, Transcriptional Regulation, Expectation Maximization (EM) |
105 | Sing-Hoi Sze, Songjian Lu, Jianer Chen |
Integrating Sample-Driven and Pattern-Driven Approaches in Motif Finding. |
WABI |
2004 |
DBLP DOI BibTeX RDF |
|
101 | Lifang Liu 0001, Licheng Jiao, Hongwei Huo |
A Greedy Two-stage Gibbs Sampling Method for Motif Discovery in Biological Sequences. |
BMEI (1) |
2008 |
DBLP DOI BibTeX RDF |
Gibbs sampling, Motif discovery, Transcription factors, Binding sites |
95 | Bin Fu, Ming-Yang Kao, Lusheng Wang 0001 |
Discovering Almost Any Hidden Motif from Multiple Sequences in Polynomial Time with Low Sample Complexity and High Success Probability. |
TAMC |
2009 |
DBLP DOI BibTeX RDF |
|
95 | Giovanna Martínez-Arellano, Carlos A. Brizuela |
Comparison of Simple Encoding Schemes in GA's for the Motif Finding Problem: Preliminary Results. |
BSB |
2007 |
DBLP DOI BibTeX RDF |
|
90 | Leung-Yau Lo, Tak-Ming Chan, Kin-Hong Lee, Kwong-Sak Leung |
Challenges rising from learning motif evaluation functions using genetic programming. |
GECCO |
2010 |
DBLP DOI BibTeX RDF |
transcription factor binding site (tfbs), modelling, genetic programming (gp), bioinformatics, motif discovery |
90 | Zhiping Wang, Mehmet M. Dalkilic, Sun Kim |
Guiding motif discovery by iterative pattern refinement. |
SAC |
2004 |
DBLP DOI BibTeX RDF |
framework, bioinformatics, pattern, Motif |
88 | Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu, Tak Wah Lam, Roni Rosenfeld, Wai Wan Tsang, David K. Smith 0001, Y. Jiang |
Finding motifs for insufficient number of sequences with strong binding to transcription facto. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
binding energy, DNA microarray, transcription factor, motif finding |
86 | Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot |
Motif Search in Graphs: Application to Metabolic Networks. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2006 |
DBLP DOI BibTeX RDF |
Reaction motif, leucine biosynthesis, evolution, graph algorithms, combinatorics, subgraph isomorphism, metabolic network, network motif |
84 | Henry C. M. Leung, Francis Y. L. Chin |
An Efficient Algorithm for the Extended (l, d)-Motif Problem with Unknown Number of Binding Sites. |
BIBE |
2005 |
DBLP DOI BibTeX RDF |
|
84 | Henry C. M. Leung, Francis Y. L. Chin |
Generalized Planted (l, d)-Motif Problem with Negative Set. |
WABI |
2005 |
DBLP DOI BibTeX RDF |
|
84 | Soon-Heng Tan, Wing-Kin Sung, See-Kiong Ng |
Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets. |
BIBE |
2004 |
DBLP DOI BibTeX RDF |
|
84 | Hiroki Arimura, Takeaki Uno |
An efficient polynomial space and polynomial delay algorithm for enumeration of maximal motifs in a sequence. |
J. Comb. Optim. |
2007 |
DBLP DOI BibTeX RDF |
Maximal motif, Data mining, Algorithm, Delay, Polynomial time, Pattern discovery, Enumeration, Motif, Sequence mining, Closed pattern, Closed itemset |
82 | Saurabh Sinha |
Discriminative motifs. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
80 | Elena Zheleva, Abdullah N. Arslan |
Fast Motif Search in Protein Sequence Databases. |
CSR |
2006 |
DBLP DOI BibTeX RDF |
motif search, PROSITE pattern, heuristic, suffix tree, preprocessing, regular expression matching |
74 | Riccardo Dondi, Guillaume Fertin, Stéphane Vialette |
Maximum Motif Problem in Vertex-Colored Graphs. |
CPM |
2009 |
DBLP DOI BibTeX RDF |
|
74 | Nadja Betzler, Michael R. Fellows, Christian Komusiewicz, Rolf Niedermeier |
Parameterized Algorithms and Hardness Results for Some Graph Motif Problems. |
CPM |
2008 |
DBLP DOI BibTeX RDF |
|
74 | Shahar Michal, Tor Ivry, Omer Cohen, Moshe Sipper, Danny Barash |
Finding a Common Motif of RNA Sequences Using Genetic Programming: The GeRNAMo System. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
|
74 | Sing-Hoi Sze, Xiaoyan Zhao |
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences. |
Systems Biology and Regulatory Genomics |
2005 |
DBLP DOI BibTeX RDF |
|
74 | Topon Kumar Paul, Hitoshi Iba |
Identification of weak motifs in multiple biological sequences using genetic algorithm. |
GECCO |
2006 |
DBLP DOI BibTeX RDF |
(l, d) motif, protein binding site, regulatory sites, genetic algorithm, clustering, DNA sequences, motif discovery |
71 | Osman Abul |
MotifHider: A knowledge hiding approach to sequence masking. |
ISCIS |
2009 |
DBLP DOI BibTeX RDF |
|
71 | Menaka Rajapakse, Bertil Schmidt, Vladimir Brusic |
Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs. |
EvoWorkshops |
2006 |
DBLP DOI BibTeX RDF |
|
71 | Vipin Narang, Wing-Kin Sung, Ankush Mittal |
LocalMotif - An In-Silico Tool for Detecting Localized Motifs in Regulatory Sequences. |
ICTAI |
2006 |
DBLP DOI BibTeX RDF |
|
71 | Jeremy Buhler, Martin Tompa |
Finding motifs using random projections. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
70 | Rupali Patwardhan, Haixu Tang, Sun Kim, Mehmet M. Dalkilic |
An Approximate de Bruijn Graph Approach to Multiple Local Alignment and Motif Discovery in Protein Sequences. |
VDMB |
2006 |
DBLP DOI BibTeX RDF |
proteins, Motif discovery, de Bruijn graph, local alignment |
70 | Shaun Mahony, David Hendrix, Terry J. Smith, Aaron Golden |
Self-Organizing Maps of Position Weight Matrices for Motif Discovery in Biological Sequences. |
Artif. Intell. Rev. |
2005 |
DBLP DOI BibTeX RDF |
biological motif discovery, self-organizing map |
67 | Viktor Martyanov, Larkin Elderon, Amy Gladfelter, Dhanalakshmi R. Nair, Robert H. Gross |
Identifying Fungal Regulatory Motif Patterns Using SCOPE, an Ensemble Learning Method Motif Finder. |
BIBE |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Takafumi Matsuura, Tohru Ikeguchi |
Chaotic Motif Sampler for Motif Discovery Using Statistical Values of Spike Time-Series. |
ICONIP (1) |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Geir Kjetil Sandve, Magnar Nedland, Øyvind Bø Syrstad, Lars Andreas Eidsheim, Osman Abul, Finn Drabløs |
Accelerating Motif Discovery: Motif Matching on Parallel Hardware. |
WABI |
2006 |
DBLP DOI BibTeX RDF |
|
66 | K. R. Seeja, Mohd. Afshar Alam, S. K. Jain |
MotifMiner: A Table Driven Greedy Algorithm for DNA Motif Mining. |
ICIC (2) |
2009 |
DBLP DOI BibTeX RDF |
Regulatory motif, Greedy approach, Motif discovery, Information content |
66 | Bin Kuang, Nini Rao |
A Two - Block Motif Discovery Method with Improved Accuracy. |
ICIC (1) |
2007 |
DBLP DOI BibTeX RDF |
Motif Base, Accuracy, Gibbs Sampling, Motif Discovery, Pwm |
66 | Bill C. H. Chang, Asanga Ratnaweera, Saman K. Halgamuge, Harry C. Watson |
Particle Swarm Optimisation for Protein Motif Discovery. |
Genet. Program. Evolvable Mach. |
2004 |
DBLP DOI BibTeX RDF |
protein sequence motif, symbolic data optimisation, motif discovery, particle swarm optimisation |
64 | Alexandre P. Francisco, Arlindo L. Oliveira, Ana T. Freitas |
Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph. |
ISBRA |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Lifang Liu 0001, Licheng Jiao |
Detection of Transcription Factor Binding Sites via Motif Clustering and Matching. |
CSSE (1) |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Xi Li, Dianhui Wang |
An Improved Genetic Algorithm for DNA Motif Discovery with Public Domain Information. |
ICONIP (1) |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Derong Liu 0001, Xiaoxu Xiong, Bhaskar DasGupta, Huaguang Zhang |
Motif discoveries in unaligned molecular sequences using self-organizing neural networks. |
IEEE Trans. Neural Networks |
2006 |
DBLP DOI BibTeX RDF |
|
64 | Brona Brejová, Daniel G. Brown 0001, Ian M. Harrower, Tomás Vinar |
New Bounds for Motif Finding in Strong Instances. |
CPM |
2006 |
DBLP DOI BibTeX RDF |
|
64 | Paul Horton, Wataru Fujibuchi |
An Upper Bound on the Hardness of Exact Matrix Based Motif Discovery. |
CPM |
2005 |
DBLP DOI BibTeX RDF |
|
61 | Christian Klukas, Falk Schreiber, Henning Schwöbbermeyer |
Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs. |
APVIS |
2006 |
DBLP DOI BibTeX RDF |
coordinated perspectives, graph drawing, network analysis, multiple views, information visualisation, network motifs, force-directed layout |
61 | Paul Horton |
Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Sequence Alignment. |
CPM |
2000 |
DBLP DOI BibTeX RDF |
|
60 | Doaa Altarawy, Mohamed A. Ismail, Sahar Mohamed Ghanem |
MProfiler: A Profile-Based Method for DNA Motif Discovery. |
PRIB |
2009 |
DBLP DOI BibTeX RDF |
DNA Motif Finding, Clustering, Bioinformatics |
60 | Kazuhito Shida |
Short Segment Frequency Equalization: A Simple and Effective Alternative Treatment of Background Models in Motif Discovery. |
PRIB |
2009 |
DBLP DOI BibTeX RDF |
Markov background model, Eukaryotic promoters, Gibbs sampling, Motif discovery, Stochastic method |
60 | Mohammed Al-Shalalfa, Reda Alhajj |
Motif Location Prediction by Divide and Conquer. |
BIRD |
2008 |
DBLP DOI BibTeX RDF |
conserved motifs, divide and conquer, gene expression data, sequence analysis, motif discovery |
60 | Ting Gong, Jianhua Xuan, Li Chen 0018, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke |
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information. |
ISBRA |
2008 |
DBLP DOI BibTeX RDF |
Motif analysis, transcriptional modules, estrogen receptor binding, gene regulatory networks, sparse component analysis |
60 | Alberto Apostolico, Matteo Comin, Laxmi Parida |
Bridging Lossy and Lossless Compression by Motif Pattern Discovery. |
GTIT-C |
2006 |
DBLP DOI BibTeX RDF |
lossy and lossless data compression, off-line textual substitution, grammar based codes, pattern matching, Pattern discovery, grammatical inference, motif |
60 | Eleazar Eskin |
From profiles to patterns and back again: a branch and bound algorithm for finding near optimal motif profiles. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
patterns, profiles, transcription factor binding sites, motif-finding |
57 | Wangsen Feng, Zhanyong Wang, Lusheng Wang 0001 |
Identification of Distinguishing Motifs. |
CPM |
2007 |
DBLP DOI BibTeX RDF |
motif detection, two groups, EM Algorithms |
54 | Santan Challa, Parimala Thulasiraman |
Protein Sequence Motif Discovery on Distributed Supercomputer. |
GPC |
2008 |
DBLP DOI BibTeX RDF |
|
54 | Anjali Mohapatra, P. M. Mishra, S. Padhy |
Motif Search in DNA Sequences Using Generalized Suffix Tree. |
ICIT |
2007 |
DBLP DOI BibTeX RDF |
|
54 | Jisu Kim, Byungkyu Park, Kyungsook Han |
Prediction of Interacting Motif Pairs Using Stochastic Boosting. |
FBIT |
2007 |
DBLP DOI BibTeX RDF |
|
54 | Ya Zhang 0002, Yixin Chen 0002, Xiang Ji |
Motif Discovery as a Multiple-Instance Problem. |
ICTAI |
2006 |
DBLP DOI BibTeX RDF |
|
54 | Audrey Girouard, Noah W. Smith, Donna K. Slonim |
Motif Evaluation by Leave-one-out Scoring. |
CIBCB |
2006 |
DBLP DOI BibTeX RDF |
|
54 | Justin Schonfeld, Dan Ashlock |
Filtration and Depth Annotation Improve Non-linear Projection for RNA Motif Discovery. |
CIBCB |
2006 |
DBLP DOI BibTeX RDF |
|
51 | Lifang Liu 0001, Licheng Jiao |
Moitf GibbsGA: Sampling Transcription Factor Binding Sites Coupled with PSFM Optimization by GA. |
ISICA |
2009 |
DBLP DOI BibTeX RDF |
|
51 | Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli |
An Interaction-Dependent Model for Transcription Factor Binding. |
Systems Biology and Regulatory Genomics |
2005 |
DBLP DOI BibTeX RDF |
|
51 | Asim S. Siddiqui, Gordon Robertson, Misha Bilenky, Tamara Astakhova, Obi L. Griffith, Maik Hassel, Keven Lin, Stephen B. Montgomery, Mehrdad Oveisi, Erin Pleasance, Neil Robertson 0004, Monica C. Sleumer, Kevin Teague, Richard Varhol, Maggie Zhang, Steven J. M. Jones |
cis-Regulatory Element Prediction in Mammalian Genomes. |
CSB Workshops |
2005 |
DBLP DOI BibTeX RDF |
|
51 | Saurabh Sinha, Martin Tompa |
Performance Comparison of Algorithms for FindingTranscription Factor Binding Sites. |
BIBE |
2003 |
DBLP DOI BibTeX RDF |
|
51 | Yoshiki Tanaka, Kuniaki Uehara |
Discover Motifs in Multi-dimensional Time-Series Using the Principal Component Analysis and the MDL Principle. |
MLDM |
2003 |
DBLP DOI BibTeX RDF |
|
50 | Yang Liu 0098, Xiaohong Jiang 0002, Huajun Chen, Jun Ma, Xiangyu Zhang |
MapReduce-Based Pattern Finding Algorithm Applied in Motif Detection for Prescription Compatibility Network. |
APPT |
2009 |
DBLP DOI BibTeX RDF |
motif detection, pattern finding, prescription compatibility, complex network, MapReduce |
50 | Jan Schröder, Lars Wienbrandt, Gerd Pfeiffer, Manfred Schimmler |
Massively Parallelized DNA Motif Search on the Reconfigurable Hardware Platform COPACOBANA. |
PRIB |
2008 |
DBLP DOI BibTeX RDF |
DNA sequence analysis, High Performance Reconfigurable Computing (HPRC), FPGA, Motif finding |
50 | Mustafa Karabulut, Turgay Ibrikci |
Fuzzy C-Means Based DNA Motif Discovery. |
ICIC (1) |
2008 |
DBLP DOI BibTeX RDF |
Fuzzy Clustering, DNA Sequences, Motif Finding |
50 | Mihail Halachev, Nematollaah Shiri |
Fast Structured Motif Search in DNA Sequences. |
BIRD |
2008 |
DBLP DOI BibTeX RDF |
performance, suffix tree, DNA sequences, structured motif |
50 | Mehmet Kaya |
Motif Discovery Using Multi-Objective Genetic Algorithm in Biosequences. |
IDA |
2007 |
DBLP DOI BibTeX RDF |
Multi-Objective Genetic Algorithms, Motif Discovery |
50 | Vered Kunik, Zach Solan, Shimon Edelman, Eytan Ruppin, David Horn |
Motif Extraction and Protein Classification. |
CSB |
2005 |
DBLP DOI BibTeX RDF |
motif extraction, enzyme classification |
50 | Benjamin J. Raphael, Lung-Tien Liu, George Varghese |
A Uniform Projection Method for Motif Discovery in DNA Sequences. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
random projection, Motif discovery, combinatorial designs, low-discrepancy sequences, transcription factor binding sites |
46 | Alberto Apostolico, Claudia Tagliacollo |
Optimal Offline Extraction of Irredundant Motif Bases. |
COCOON |
2007 |
DBLP DOI BibTeX RDF |
Irredundant Motif, Pattern Matching, Design and Analysis of Algorithms, Motif Discovery, Basis |
44 | Bin Fu, Ming-Yang Kao, Lusheng Wang 0001 |
Efficient Algorithms for Model-Based Motif Discovery from Multiple Sequences. |
TAMC |
2008 |
DBLP DOI BibTeX RDF |
|
44 | Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali |
A parallel architecture for regulatory motif algorithm assessment. |
IPDPS |
2008 |
DBLP DOI BibTeX RDF |
|
44 | Ruoming Jin, Scott McCallen, Eivind Almaas |
Trend Motif: A Graph Mining Approach for Analysis of Dynamic Complex Networks. |
ICDM |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Bernard Chen 0001, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan 0001 |
Super Granular Shrink-SVM Feature Elimination (Super GS-SVM-FE) Model for Protein Sequence Motif Information Extraction. |
BIBE |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Jason Tsong-Li Wang, Dongrong Wen, Bruce A. Shapiro, Katherine G. Herbert, Jing Li, Kaushik Ghosh |
Toward an Integrated RNA Motif Database. |
DILS |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Erliang Zeng, Giri Narasimhan |
Enhancing Motif Refinement by Incorporating Comparative Genomics Data. |
ISBRA |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Huan Yu, Minping Qian, Minghua Deng |
Using a Stochastic AdaBoost Algorithm to Discover Interactome Motif Pairs from Sequences. |
ICIC (3) |
2006 |
DBLP DOI BibTeX RDF |
|
44 | Yoshiki Tanaka, Kazuhisa Iwamoto, Kuniaki Uehara |
Discovery of Time-Series Motif from Multi-Dimensional Data Based on MDL Principle. |
Mach. Learn. |
2005 |
DBLP DOI BibTeX RDF |
time-series motifs, multi-dimensional time-series data, MDL principle good, PCA |
44 | Manuel Middendorf, Anshul Kundaje, Mihir Shah, Yoav Freund, Chris Wiggins 0001, Christina S. Leslie |
Motif Discovery Through Predictive Modeling of Gene Regulation. |
RECOMB |
2005 |
DBLP DOI BibTeX RDF |
|
44 | Lusheng Wang 0001, Liang Dong, Hui Fan |
Randomized Algorithms for Motif Detection. |
ISAAC |
2004 |
DBLP DOI BibTeX RDF |
|
44 | Zhaohui Sun, Jingyi Yang, Jitender S. Deogun |
MISAE: A New Approach for Regulatory Motif Extraction. |
CSB |
2004 |
DBLP DOI BibTeX RDF |
|
43 | Peera Liewlom, Thanawin Rakthanmanon, Kitsana Waiyamai |
Prediction of Enzyme Class by Using Reactive Motifs Generated from Binding and Catalytic Sites. |
ADMA |
2007 |
DBLP DOI BibTeX RDF |
mutation control, sequence motif, reactive motif, enzyme function prediction, catalytic site, amino acid substitution group, binding site |
41 | Christina Boucher |
Faster Algorithms for Sampling and Counting Biological Sequences. |
SPIRE |
2009 |
DBLP DOI BibTeX RDF |
|
41 | Pratibha Mehta Luthra, Sandeep Kumar Barodia, Amresh Prakash, Ramraghubir |
cDNA-Derived Amino Acid Sequence from Rat Brain A2aR Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A2aR. |
PRIB |
2007 |
DBLP DOI BibTeX RDF |
Adenosine A2a receptor, cDNA, GPCRs, RT-PCR, TM 5 |
41 | Mehmet Kaya |
A Multi-Objective Genetic Algorithm for Discovering Non-Dominated Motifs in DNA Sequences. |
HIS |
2007 |
DBLP DOI BibTeX RDF |
|
41 | Nadia Pisanti, Alexandra M. Carvalho, Laurent Marsan, Marie-France Sagot |
RISOTTO: Fast Extraction of Motifs with Mismatches. |
LATIN |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Hiroki Arimura, Takeaki Uno |
A Polynomial Space and Polynomial Delay Algorithm for Enumeration of Maximal Motifs in a Sequence. |
ISAAC |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Wengang Zhou, Chunguang Zhou, Guixia Liu, Yanxin Huang |
Identification of Transcription Factor Binding Sites Using Hybrid Particle Swarm Optimization. |
RSFDGrC (2) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Fuqiang Ban, Savariraj Kingsley, Ross Johnson, Hicham Fenniri, Andriy Kovalenko 0001 |
Modeling the Zinc Chelating Rosette Nanotube. |
ICMENS |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Rhonda Harrison, Charles DeLisi |
A hypothesis driven approach to condition specific transcription factor binding site characterization in S.c.. |
SAC |
2002 |
DBLP DOI BibTeX RDF |
|
41 | Laxmi Parida, Isidore Rigoutsos, Daniel E. Platt |
An Output-Sensitive Flexible Pattern Discovery Algorithm. |
CPM |
2001 |
DBLP DOI BibTeX RDF |
|
41 | Erika Tateishi, Osamu Maruyama, Satoru Miyano |
Extracting Best Consensus Motifs from Positive and Negative Examples. |
STACS |
1996 |
DBLP DOI BibTeX RDF |
algorithms and computational complexity, genome informatics |
39 | Armando Muscariello, Guillaume Gravier, Frédéric Bimbot |
Variability Tolerant Audio Motif Discovery. |
MMM |
2009 |
DBLP DOI BibTeX RDF |
audio pattern discovery, variable motif, dynamic time warping, normalized edit distance |
39 | Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran |
Fast and Practical Algorithms for Planted (l, d) Motif Search. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
Planted motif search problem, challenging instances, exact algorithms, branch and bound algorithms |
39 | Michael A. Lones, Andy M. Tyrrell |
Regulatory Motif Discovery Using a Population Clustering Evolutionary Algorithm. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
population-based data clustering, muscle-specific gene expression, Evolutionary computation, motif discovery, transcription factor binding sites |
39 | Piedachu Peris, Damián López, Marcelino Campos, José M. Sempere |
Protein Motif Prediction by Grammatical Inference. |
ICGI |
2006 |
DBLP DOI BibTeX RDF |
protein motif location, bioinformatics, Grammatical inference |
39 | Michael A. Lones, Andrew M. Tyrrell |
The evolutionary computation approach to motif discovery in biological sequences. |
GECCO Workshops |
2005 |
DBLP DOI BibTeX RDF |
biological sequence understanding, evolutionary computation, motif discovery |
37 | Mehmet Kaya, Melikali Güç |
A Novel Approach to Extract Structured Motifs by Multi-Objective Genetic Algorithm. |
CBMS |
2008 |
DBLP DOI BibTeX RDF |
structured motif discovery, multi-objective genetic algorithm |
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