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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 2354 occurrences of 1007 keywords
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Results
Found 18688 publication records. Showing 18688 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
139 | Kang-Ping Liu, Jinn-Moon Yang |
A Gaussian Evolutionary Method for Predicting Protein-Protein Interaction Sites. |
EvoBIO |
2007 |
DBLP DOI BibTeX RDF |
Atomic solvation parameter, Gaussian evolutionary method, protein-protein binding site, protein-protein interactions |
136 | Scooter Willis |
Protein CorreLogo: an X3D representation of co-evolving pairs, tertiary structure, ligand binding pockets and protein-protein interactions in protein families. |
Web3D |
2007 |
DBLP DOI BibTeX RDF |
Protein CorreLogo, mutual information, X3D |
112 | Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen 0006 |
Inferring domain-domain interactions from protein-protein interactions. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
112 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001, Baldev S. Sidhu |
Protein Ontology: Vocabulary for Protein Data. |
ICITA (1) |
2005 |
DBLP DOI BibTeX RDF |
Protein Informatics, Biomedical Systems, Data Integration, Systems Biology, Biomedical Ontologies, Protein Ontology |
102 | Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen 0006, Fengzhu Sun |
Prediction of Protein Function Using Protein-Protein Interaction Data. |
CSB |
2002 |
DBLP DOI BibTeX RDF |
|
101 | Huang-Cheng Kuo, Kuan-Yu Su, Ping-Lin Ong, Jen-Peng Huang |
Learning a prediction model for protein-protein recognition. |
ICIS |
2009 |
DBLP DOI BibTeX RDF |
protein complex, protein-protein recognition, genetic programming, feature vector, binding site |
95 | Yasir Arafat, Gour C. Karmakar, Joarder Kamruzzaman, Juan Fernández-Recio |
Predicting Protein-Protein Interface using Desolvation Energy Similarity Matching. |
CIBCB |
2006 |
DBLP DOI BibTeX RDF |
|
93 | Christopher J. O. Baker, René Witte |
Mutation Mining-A Prospector's Tale. |
Inf. Syst. Frontiers |
2006 |
DBLP DOI BibTeX RDF |
Protein structure annotation, Protein mutation, Haloalkane dehalogenase, Biphenyl dioxygenase, Xylanase, Data mining, Text mining |
91 | Lisa Bartoli, Pier Luigi Martelli, Ivan Rossi, Piero Fariselli, Rita Casadio |
Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks. |
CMSB |
2009 |
DBLP DOI BibTeX RDF |
protein-protein interaction site, patch smoothing, neural network, interacting surfaces |
90 | Hiroshi Mamitsuka |
Essential Latent Knowledge for Protein-Protein Interactions: Analysis by an Unsupervised Learning Approach. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2005 |
DBLP DOI BibTeX RDF |
data mining, machine learning, Biology and genetics, mining methods and algorithms |
90 | Tuan Nam Tran, Kenji Satou, Tu Bao Ho |
Using Inductive Logic Programming for Predicting Protein-Protein Interactions from Multiple Genomic Data. |
PKDD |
2005 |
DBLP DOI BibTeX RDF |
|
90 | Alexandre G. de Brevern, Serge A. Hazout |
Hybrid Protein Model (HPM): A Method to Compact Protein 3D-Structure Information and Physicochemical Properties. |
SPIRE |
2000 |
DBLP DOI BibTeX RDF |
Hybrid Protein Model, protein 3D-structure, physicochemical properties, protein 1D-sequence, structural alphabet, unsupervised classifier, protein blocks, sequence information, amino acid residues, pattern matching, fuzzy model, biology computing, Bayesian approach, structural biology |
89 | William Novak, Hongming Wang, Goran Krilov |
Role of protein flexibility in the design of Bcl-XL targeting agents: insight from molecular dynamics. |
J. Comput. Aided Mol. Des. |
2009 |
DBLP DOI BibTeX RDF |
Protein flexibility, Protein-protein interfaces, Bcl-XL, Ligand-protein interactions, ABT-737, Molecular dynamics |
85 | Ozlem Keskin, Attila Gürsoy, Ruth Nussinov |
Principles of Protein Recognition and Properties of Protein-protein Interfaces. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
84 | Serdar Cakici, Selcuk Sumengen, Osman Ugur Sezerman, Selim Balcisoy |
DockPro: a VR-based tool for protein-protein docking problem. |
VRCAI |
2008 |
DBLP DOI BibTeX RDF |
medicine and healthcare, protein-protein docking, virtual reality |
82 | Minghua Deng, Ting Chen 0006, Fengzhu Sun |
An integrated probabilistic model for functional prediction of proteins. |
RECOMB |
2003 |
DBLP DOI BibTeX RDF |
function prediction, pfam domain, Markov random field, protein-protein interaction, Gibbs sampler |
80 | Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre |
Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
graph algorithms, genetics, biology, bioinformatics (genome or protein) databases, Computations on discrete structures |
80 | Md. Altaf-Ul-Amin, Toshihiro Koma, Ken Kurokawa, Shigehiko Kanaya |
Prediction of Protein Functions Based on Protein-Protein Interaction Networks: A Min-Cut Approach. |
ICDE Workshops |
2005 |
DBLP DOI BibTeX RDF |
heuristic method, min-cut, protein function prediction, protein-protein interaction network |
79 | Dong-Soo Han, Hong-Soog Kim, Woo-Hyuk Jang, Sung-Doke Lee |
Domain Combination Based Protein-Protein Interaction Possibility Ranking Method. |
BIBE |
2004 |
DBLP DOI BibTeX RDF |
|
79 | N. Rattanakronkul, T. Wattarujeekrit, Kitsana Waiyamai |
Predicting Protein Structural Class from Closed Protein Sequences. |
PAKDD |
2003 |
DBLP DOI BibTeX RDF |
Protein Structural Class, Closed Sequence, Data Mining, Bioinformatics, CARs |
78 | Andrey A. Ivanov |
Explore Protein-Protein Interactions for Cancer Target Discovery Using the OncoPPi Portal. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Kalpana Raja, Jeyakumar Natarajan, Finn Kuusisto, John W. Steill, Ian Ross, James A. Thomson, Ron M. Stewart |
Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Yiwei Li, Lucian Ilie |
Predicting Protein-Protein Interactions Using SPRINT. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Jan Byska, Adam Jurcík, Katarína Furmanová, Barbora Kozlíková, Jan J. Palecek |
Visual Analysis of Protein-Protein Interaction Docking Models Using COZOID Tool. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Ina Koch, Oliver Philipp, Andrea Hamann, Heinz D. Osiewacz |
Reconstruction of Protein-Protein Interaction Networks Using Homology-Based Search: Application to the Autophagy Pathway of Aging in Podospora anserina. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Chiara Pastrello, Max Kotlyar, Igor Jurisica |
Informed Use of Protein-Protein Interaction Data: A Focus on the Integrated Interactions Database (IID). |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Gregorio Alanis-Lobato, Martin H. Schaefer 0001 |
Generation and Interpretation of Context-Specific Human Protein-Protein Interaction Networks with HIPPIE. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Farideh Halakou, Attila Gürsoy, Ozlem Keskin |
Embedding Alternative Conformations of Proteins in Protein-Protein Interaction Networks. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Mona Singh 0001 |
From Protein Interaction Networks to Protein Function. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
78 | Nir Yosef, Eytan Ruppin, Roded Sharan |
Cross-Species Analysis of Protein-protein Interaction Networks. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
78 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Ontological Foundation for Protein Data Models. |
OTM Workshops |
2005 |
DBLP DOI BibTeX RDF |
|
78 | Byungkyu Park, Kyungsook Han |
Online Prediction of Interacting Proteins with a User-Specified Protein. |
International Conference on Computational Science (3) |
2005 |
DBLP DOI BibTeX RDF |
|
78 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Protein Ontology Project in 2007: Looking Backward and Forward. |
CBMS |
2007 |
DBLP DOI BibTeX RDF |
Protein Informatics, Data Integration, Bioinformatics, Proteomics, Data Semantics, Biomedical Ontologies, Protein Ontology |
74 | Shi-Hua Zhang, Xue-Mei Ning, Hong-Wei Liu, Xiang-Sun Zhang |
Prediction of Protein Complexes Based on Protein Interaction Data and Functional Annotation Data Using Kernel Methods. |
ICIC (3) |
2006 |
DBLP DOI BibTeX RDF |
|
74 | Zahra Nafar, Ashkan Golshani |
Data Mining Methods for Protein-Protein Interactions. |
CCECE |
2006 |
DBLP DOI BibTeX RDF |
|
74 | Haemoon Jung, Kyungsook Han |
Prediction of Protein Functions Using Protein Interaction Data. |
International Conference on Computational Science |
2004 |
DBLP DOI BibTeX RDF |
|
74 | Hiroshi Mamitsuka |
Efficient Mining from Heterogeneous Data Sets for Predicting Protein-Protein Interactions. |
DEXA Workshops |
2003 |
DBLP DOI BibTeX RDF |
|
72 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Creating a Protein Ontology Resource. |
CSB Workshops |
2005 |
DBLP DOI BibTeX RDF |
Protein Informatics, Biomedical Systems, Data Integration, Systems Biology, Biomedical Ontologies, Protein Ontology |
72 | Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald |
A novel ensemble-based scoring and search algorithm for protein redesign, and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
enzyme design, fluorescence binding assay, molecular ensemble, non-ribosomal peptide synthetase, protein flexibility, protein-ligand binding, protein design |
72 | L. Paul Chew, Klara Kedem |
Finding the consensus shape for a protein family. |
SCG |
2002 |
DBLP DOI BibTeX RDF |
protein alignment, protein families, unit-vector RMS, dynamic programming, protein structure, multiple alignment |
72 | Gordon M. Crippen |
Protein folding potential functions. |
HICSS (5) |
1995 |
DBLP DOI BibTeX RDF |
macromolecules, potential energy functions, intramolecular mechanics, protein structure recognition problem, globular protein sequence, plausible protein conformations, native conformation, single-chain proteins, nonnative structures, multichain aggregates, disulphide bonds, bound ligands, protein folding, proteins, potential functions, molecular configurations |
71 | Jung Eun Shim, Insuk Lee |
Construction of Functional Protein Networks Using Domain Profile Associations. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Genki Terashi, Charles Christoffer, Daisuke Kihara |
Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Thomas Gueudré, Carlo Baldassi, Andrea Pagnani, Martin Weigt |
Predicting Interacting Protein Pairs by Coevolutionary Paralog Matching. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Alfonso Valencia, Florencio Pazos |
Computational Methods to Predict Protein Interaction Partners. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Frank Alber, Brian T. Chait, Michael P. Rout, Andrej Sali |
Integrative Structure Determination of Protein Assemblies by Satisfaction of Spatial Restraints. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Benjamin A. Shoemaker, Anna R. Panchenko |
Handling Diverse Protein Interaction Data: Integration, Storage and Retrieval. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Sergei Maslov |
Topological and Dynamical Properties of Protein Interaction Networks. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Peter Uetz, Björn Titz, Gerard Cagney |
Experimental Methods for Protein Interaction Identification and Characterization. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Katia S. Guimarães, Teresa M. Przytycka |
Protein Interaction Network Based Prediction of Domain-Domain and Domain-Peptide Interactions. |
Protein-protein Interactions and Networks |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001, Baldev S. Sidhu |
OWL, Proteins and Data Integration. |
Australian Conference on Artificial Intelligence |
2005 |
DBLP DOI BibTeX RDF |
Information Retrieval, Knowledge Representation, Data Integration, Biomedical Ontologies, Protein Ontology |
69 | Susanne Eyrisch, Volkhard Helms |
What induces pocket openings on protein surface patches involved in protein-protein interactions? |
J. Comput. Aided Mol. Des. |
2009 |
DBLP DOI BibTeX RDF |
Binding pocket, CONCOORD, Normal mode analysis, Protein-protein interaction inhibition, Structure-based drug design, tCONCOORD, Molecular dynamics simulation |
68 | Xiang Guo, Hai Hu, Michael N. Liebman, Craig D. Shriver |
Semantic Similarity-based Validation of Human Protein-Protein Interactions. |
CSB Workshops |
2005 |
DBLP DOI BibTeX RDF |
|
68 | Kyungsook Han, Hyoungguen Kim |
A Mobile System for Extracting and Visualizing Protein-Protein Interactions. |
EurAsia-ICT |
2002 |
DBLP DOI BibTeX RDF |
|
68 | Alvaro J. González, Li Liao |
Constrained Fisher Scores Derived from Interaction Profile Hidden Markov Models Improve Protein to Protein Interaction Prediction. |
BICoB |
2009 |
DBLP DOI BibTeX RDF |
3DID, Support vector machines, Hidden Markov models, Domains, Protein-protein interaction |
68 | Conrad Plake, Jörg Hakenberg, Ulf Leser |
Optimizing syntax patterns for discovering protein-protein interactions. |
SAC |
2005 |
DBLP DOI BibTeX RDF |
syntax patterns, genetic algorithm, information extraction, protein-protein interactions |
68 | Darby Tien-Hao Chang, Chien-Yu Chen 0001, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang |
An Efficient Mechanism for Prediction of Protein-Ligand Interactions Based on Analysis of Protein Tertiary Substructures. |
BIBE |
2004 |
DBLP DOI BibTeX RDF |
protein structural analysis, protein tertiary structure, kernel density estimation |
67 | Yaohang Li, Douglas Wardell, Vincent W. Freeh |
Resource-efficient computing paradigm for computational protein modeling applications. |
IPDPS |
2009 |
DBLP DOI BibTeX RDF |
|
67 | Jung-Hsien Chiang, Tsung-Lu Michael Lee |
In Silico Prediction of Human Protein Interactions Using Fuzzy-SVM Mixture Models and Its Application to Cancer Research. |
IEEE Trans. Fuzzy Syst. |
2008 |
DBLP DOI BibTeX RDF |
|
67 | Yi Pan 0001 |
Protein Structure Prediction and Its Understanding Based on Machine Learning Methods. |
BIBE |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Byung-Hoon Park, Bing Zhang 0003, Tatiana V. Karpinets, Nagiza F. Samatova |
Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance. |
BIBM |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Advances in Protein Ontology Project. |
CBMS |
2006 |
DBLP DOI BibTeX RDF |
|
67 | Amandeep S. Sidhu, Tharam S. Dillon, Farookh Khadeer Hussain |
Accomplishments and Challenges of Protein Ontology. |
COMPSAC (1) |
2006 |
DBLP DOI BibTeX RDF |
|
67 | Namshik Han, Hyunwoo Kim, Kyungsook Han |
Computational Approach to Structural Analysis of Protein-RNA Complexes. |
International Conference on Computational Science |
2003 |
DBLP DOI BibTeX RDF |
|
67 | Dianhui Wang, Nung Kion Lee, Tharam S. Dillon, Nicholas J. Hoogenraad |
Protein Sequences Classification Using Modular RBF Neural Networks. |
Australian Joint Conference on Artificial Intelligence |
2002 |
DBLP DOI BibTeX RDF |
|
67 | Yu-Feng Huang, Chia-Chen Chang, Chien-Kang Huang |
Massive Protein Structural Property Explorations Using New Indexing Mechanism. |
ER Workshops |
2007 |
DBLP DOI BibTeX RDF |
Residue environmental sphere (RES), protein structural property mining, residue contact, disulfide bond |
67 | Xue-wen Chen 0001, Mei Liu, Yong Hu 0002 |
Integrative Neural Network Approach for Protein Interaction Prediction from Heterogeneous Data. |
ADMA |
2008 |
DBLP DOI BibTeX RDF |
Interaction Network Prediction, Heterogeneous Data Integration, Integrative Neural Network, Protein-Protein Interaction |
67 | Kunpeng Zhang, Yun Xu, Yifei Shen, Guoliang Chen 0001 |
Using a Neural Networking Method to Predict the Protein Phosphorylation Sites with Specific Kinase. |
ISNN (2) |
2006 |
DBLP DOI BibTeX RDF |
phosphorylation site predicting, protein kinase, PKA, IKK, Neural Network, protein structure |
67 | L. Paul Chew, Klara Kedem |
Finding the Consensus Shape for a Protein Family. |
Algorithmica |
2004 |
DBLP DOI BibTeX RDF |
Protein shape, Dynamic programming, Protein structure, Computational molecular biology |
67 | Pengjun Pei, Aidong Zhang |
A Topological Measurement for Weighted Protein Interaction Network. |
CSB |
2005 |
DBLP DOI BibTeX RDF |
weighted graph model, topological measurement, data integration, Protein-protein interaction, small world network, protein interaction network |
67 | Arvind Gupta, Ján Manuch, Ladislav Stacho |
Inverse Protein Folding in 2D HP Mode (Extended Abstract). |
CSB |
2004 |
DBLP DOI BibTeX RDF |
inverse protein folding, protein stability, protein design, HP model |
67 | Marcella A. McClure, Rajasekhar Raman |
Parameterization studies of hidden Markov models representing highly divergent protein sequences. |
HICSS (5) |
1995 |
DBLP DOI BibTeX RDF |
parameterization studies, highly divergent protein sequences, complex genome analysis, nucleic acid, molecular evolutionary mechanisms, homologous sequences, distantly related proteins, HMM approaches, multiple protein sequence alignment, highest average entropylposition model, biologically informative model, biological features, protein family, model length, training set size, biologically informative HMMs, hidden Markov models, hidden Markov models, DNA, genetics, genetics, biology computing, optimal model, protein sequences |
65 | Sonja Biedermann, Monika Henzinger, Christian Schulz 0003, Bernhard Schuster |
Vienna Graph Clustering. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Markus List, Nicolas Alcaraz, Richa Batra |
De Novo Pathway-Based Classification of Breast Cancer Subtypes. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Angela Re, Paola Lecca |
On TD-WGcluster: Theoretical Foundations and Guidelines for the User. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Xiaoyang Jing, Hong Zeng, Sheng Wang 0001, Jinbo Xu |
A Web-Based Protocol for Interprotein Contact Prediction by Deep Learning. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Nicolas Alcaraz, Anne Hartebrodt, Markus List |
De Novo Pathway Enrichment with KeyPathwayMiner. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Wayne B. Hayes |
An Introductory Guide to Aligning Networks Using SANA, the Simulated Annealing Network Aligner. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Robin Haw, Fred Loney 0001, Edison Ong, Yongqun He, Guanming Wu |
Perform Pathway Enrichment Analysis Using ReactomeFIViz. |
Protein-Protein Interaction Networks |
2020 |
DBLP DOI BibTeX RDF |
|
64 | Hon Nian Chua, Wing-Kin Sung, Limsoon Wong |
Exploiting Indirect Neighbours and Topological Weight to Predict Protein Function from Protein-Protein Interactions. |
BioDM |
2006 |
DBLP DOI BibTeX RDF |
|
63 | Byungkyu Park, Kyungsook Han |
Estimating the Reliability of Protein-Protein Interactions. |
FBIT |
2007 |
DBLP DOI BibTeX RDF |
|
63 | Junfeng Xia, Bing Wang 0004, De-Shuang Huang |
Inferring Strengths of Protein-Protein Interaction Using Artificial Neural Network. |
IJCNN |
2007 |
DBLP DOI BibTeX RDF |
|
62 | Anna Antony, Srilaxmi Basetty, Shielly Hartanto, Mathew J. Palakal |
Computational approach to biological validation of protein-protein interactions discovered using literature mining. |
SAC |
2008 |
DBLP DOI BibTeX RDF |
implicit associations, protein-protein interactions, association discovery, literature mining |
62 | Chishe Wang, Jiaxing Cheng, Shoubao Su, Dongzhe Xu |
Identification of Interface Residues Involved in Protein-Protein Interactions Using Naïve Bayes Classifier. |
ADMA |
2008 |
DBLP DOI BibTeX RDF |
Naïve Bayes classifier, Sequence profile, Residue accessible surface area, Protein-protein interactions |
62 | Max Kotlyar, Igor Jurisica |
Predicting Protein-Protein Interactions by Association Mining. |
Inf. Syst. Frontiers |
2006 |
DBLP DOI BibTeX RDF |
Protein-protein interactions, Association mining |
62 | Martin Farach-Colton, Yang Huang, John L. L. Woolford |
Discovering temporal relations in molecular pathways using protein-protein interactions. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
molecular pathways, probe interval graphs, ribosomal assembly pathway, vertex ordering, interval graphs, protein-protein interaction |
62 | Roded Sharan, Trey Ideker, Brian P. Kelley, Ron Shamir, Richard M. Karp |
Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
heavy subgraph, protein complex, probabilistic model, conservation, comparative analysis, protein interaction network, yeast, bacteria |
61 | Yi Pan 0001 |
Protein structure prediction and understanding using machine learning methods. |
GrC |
2005 |
DBLP DOI BibTeX RDF |
|
61 | Zeyar Aung, Kian-Lee Tan |
Automatic Protein Structure Classification through Structural Fingerprinting. |
BIBE |
2004 |
DBLP DOI BibTeX RDF |
|
61 | Mona Singh 0001, Peter S. Kim |
Towards predicting coiled-coil protein interactions. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
61 | Jinbo Xu, Bonnie Berger |
Fast and accurate algorithms for protein side-chain packing. |
J. ACM |
2006 |
DBLP DOI BibTeX RDF |
Protein side-chain packing, approximate algorithm, polynomial-time approximation scheme, tree decomposition |
61 | Rolf Backofen, Sebastian Will |
A Constraint-Based Approach to Fast and Exact Structure Prediction in Three-Dimensional Protein Models. |
Constraints An Int. J. |
2006 |
DBLP DOI BibTeX RDF |
Face-centered cubic lattice, Constraint programming, Protein structure prediction, HP-model |
61 | Bill C. H. Chang, Asanga Ratnaweera, Saman K. Halgamuge, Harry C. Watson |
Particle Swarm Optimisation for Protein Motif Discovery. |
Genet. Program. Evolvable Mach. |
2004 |
DBLP DOI BibTeX RDF |
protein sequence motif, symbolic data optimisation, motif discovery, particle swarm optimisation |
61 | Michael A. Erdmann |
Protein similarity from knot theory and geometric convolution. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
writhing, homotopy, protein structure, homology, robot motion planning, knot theory |
61 | Virginio Cantoni, Riccardo Gatti, Luca Lombardi |
Towards Protein Interaction Analysis through Surface Labeling. |
ICIAP |
2009 |
DBLP DOI BibTeX RDF |
surface labeling, protein-protein interaction, heat diffusion |
61 | Angelo Marcello Anile, Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Salvatore Spinella |
Determination of protein structure and dynamics combining immune algorithms and pattern search methods. |
Nat. Comput. |
2007 |
DBLP DOI BibTeX RDF |
pattern search methods, DIRECT, protein folding, protein structure prediction, Immune Algorithms, Clonal Selection Algorithms, structural bioinformatics |
61 | L. Paul Chew |
Exact computation of protein structure similarity. |
SCG |
2006 |
DBLP DOI BibTeX RDF |
protein geometry, structure comparison, dynamic programming, global optimization, convex hull, proteins, protein structure, extreme points |
61 | Alexander Kister |
Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Patterns. |
ISBRA |
2009 |
DBLP DOI BibTeX RDF |
Beta-sandwich proteins, supersecondary structure, protein structure classification, sequence alignment, protein folding, protein structure prediction |
61 | Mario Cannataro, Pietro Hiram Guzzi, Pierangelo Veltri |
myMCL: A Web Portal for Protein Complexes Prediction. |
CBMS |
2008 |
DBLP DOI BibTeX RDF |
Protein to Protein Interactions, Protein Complexes, MCL, Clustering |
61 | Robert B. Russell, R. R. Copley, Geoffrey J. Barton |
Protein fold recognition from secondary structure assignments. |
HICSS (5) |
1995 |
DBLP DOI BibTeX RDF |
protein fold recognition, secondary structure assignments, experimental restraints, protein structural domains, predicted secondary structure elements, connected secondary structures, plausible topologies, E. coli bio protein, SH2 fold, database, query processing, database management systems, query, errors, biology computing, proteins, chemistry computing, query pattern, database structure |
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