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Found 12322 publication records. Showing 12322 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Kord M. Kober, Liam Berger, Ritu Roy, Adam B. Olshen |
Torch-eCpG: a fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing units.  |
BMC Bioinform.  |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Dimitrios Iliadis, Bernard De Baets, Tapio Pahikkala, Willem Waegeman |
A comparison of embedding aggregation strategies in drug-target interaction prediction. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Valeriia Sherina, Helene R. McMurray, Winslow Powers, Hartmut Land, Tanzy M. T. Love, Matthew N. McCall |
Correction: Multiple imputation and direct estimation for qPCR data with non-detects. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Anthony Baptista, Galadriel Brière, Anaïs Baudot |
Random walk with restart on multilayer networks: from node prioritisation to supervised link prediction and beyond. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Onder Tutsoy, Gizem Gul Koç |
Deep self-supervised machine learning algorithms with a novel feature elimination and selection approaches for blood test-based multi-dimensional health risks classification. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Patrick E. Gelbach, Handan Cetin, Stacey D. Finley |
Flux sampling in genome-scale metabolic modeling of microbial communities. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jader M. Caldonazzo Garbelini, Danilo Sipoli Sanches, Aurora T. R. Pozo |
biomapp::chip: large-scale motif analysis. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Dharmesh D. Bhuva, Chin Wee Tan, Ning Liu, Holly J. Whitfield, Nicholas Papachristos, Samuel C. Lee, Malvika Kharbanda, Ahmed Mohamed, Melissa J. Davis |
vissE: a versatile tool to identify and visualise higher-order molecular phenotypes from functional enrichment analysis. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Tim U. H. Baumeister, Eivind Aadland, Roger G. Linington, Olav M. Kvalheim |
Multivariate pattern analysis: a method and software to reveal, quantify, and visualize predictive association patterns in multicollinear data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Andrew D. McCall |
Colocalization by cross-correlation, a new method of colocalization suited for super-resolution microscopy. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Adusei Bofa, Temesgen Zewotir |
Optimizing spatio-temporal correlation structures for modeling food security in Africa: a simulation-based investigation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yanling Liu, Ruiyan Zhang, Xiaojing Dong, Hong Yang, Jing Li, Hongyan Cao, Jing Tian, Yanbo Zhang |
DAE-CFR: detecting microRNA-disease associations using deep autoencoder and combined feature representation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Haiyang Chang, Daniel A. Ashlock, Steffen P. Graether, Stefan M. Keller |
Anchor Clustering for million-scale immune repertoire sequencing data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yufang Liu, Yongkai Chen, Haoran Lu, Wenxuan Zhong, Guo-Cheng Yuan, Ping Ma |
Orthogonal multimodality integration and clustering in single-cell data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lu Li, Shi Yan, Barbara M. Bakker, Huub C. J. Hoefsloot, Bo Chawes, David Horner, Morten A. Rasmussen, Age K. Smilde, Evrim Acar |
Analyzing postprandial metabolomics data using multiway models: a simulation study. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lixuan Mu, Jiangning Song, Tatsuya Akutsu, Tomoya Mori |
DiCleave: a deep learning model for predicting human Dicer cleavage sites. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Sedighe Rastahi, Azadeh Saki, Hamed Tabesh |
Modifying the false discovery rate procedure based on the information theory under arbitrary correlation structure and its performance in high-dimensional genomic data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhanshan (Sam) Ma |
Towards a unified medical microbiome ecology of the OMU for metagenomes and the OTU for microbes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Rukundo Prince, Zhendong Niu, Zahid Younas Khan, Masabo Emmanuel, Niyishaka Patrick |
COVID-19 detection from chest X-ray images using CLAHE-YCrCb, LBP, and machine learning algorithms. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Xin Zeng, Guang-Peng Su, Shu-Juan Li, Shuang-Qing Lv, Meng-Liang Wen, Yi Li |
Drug-Online: an online platform for drug-target interaction, affinity, and binding sites identification using deep learning. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiao He, Ming Yan |
GraphKM: machine and deep learning for KM prediction of wildtype and mutant enzymes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yiran Huang, Fuhao Chen, Hongtao Sun, Cheng Zhong |
Exploring gene-patient association to identify personalized cancer driver genes by linear neighborhood propagation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Shuo Wang, Yuanning Liu, Hao Zhang, Zhen Liu |
SurvConvMixer: robust and interpretable cancer survival prediction based on ConvMixer using pathway-level gene expression images. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Hyun Jung Lee, Utku Ozbulak, Homin Park, Stephen Depuydt, Wesley De Neve, Joris Vankerschaver |
Assessing the reliability of point mutation as data augmentation for deep learning with genomic data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Leandro Y. S. Okimoto, Rayol Mendonca-Neto, Fabíola G. Nakamura, Eduardo Freire Nakamura, David Fenyö, Cláudio Teixeira Silva |
Few-shot genes selection: subset of PAM50 genes for breast cancer subtypes classification. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Eduardo N. Castanho, João Lobo, Rui Henriques, Sara C. Madeira |
Correction: G-bic: generating synthetic benchmarks for biclustering. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yeon-Ji Park, Geun-Je Yang, Chae-Bong Sohn, Soo Jun Park |
GPDminer: a tool for extracting named entities and analyzing relations in biological literature. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Dengju Yao, Yuexiao Deng, Xiaojuan Zhan, Xiaorong Zhan |
Predicting lncRNA-disease associations using multiple metapaths in hierarchical graph attention networks. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Morteza Rakhshaninejad, Mohammad Fathian, Reza Shirkoohi, Farnaz Barzinpour, Amir H. Gandomi |
Refining breast cancer biomarker discovery and drug targeting through an advanced data-driven approach. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jiahao Wei, Linzhang Lu, Tie Shen |
Predicting drug-protein interactions by preserving the graph information of multi source data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Adam Bessa-Silva |
Fasta2Structure: a user-friendly tool for converting multiple aligned FASTA files to STRUCTURE format. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Georg Hahn, Sharon Marie Lutz, Julian Hecker, Dmitry Prokopenko, Michael H. Cho, Edwin K. Silverman, Scott T. Weiss, Christoph Lange 0003 |
Fast computation of the eigensystem of genomic similarity matrices. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Mahira Kirmani, Gagandeep Kour, Mudasir Mohd, Nasrullah Sheikh, Dawood Ashraf Khan, Zahid Maqbool, Mohsin Altaf Wani, Abid Hussain Wani |
Biomedical semantic text summarizer. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lei Chen 0002, Chenyu Zhang, Jing Xu |
PredictEFC: a fast and efficient multi-label classifier for predicting enzyme family classes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yuke Xie, Xueqing Peng, Peiluan Li |
MIWE: detecting the critical states of complex biological systems by the mutual information weighted entropy. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | S. R. Oshternian, S. Loipfinger, A. Bhattacharya, Rudolf S. N. Fehrmann |
Exploring combinations of dimensionality reduction, transfer learning, and regularization methods for predicting binary phenotypes with transcriptomic data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yu Han, Qiong Zhou, Leibo Liu, Jianwei Li, Yuan Zhou |
DNI-MDCAP: improvement of causal MiRNA-disease association prediction based on deep network imputation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yifan Li, Qianying Li, Lvying Wu, Haiyan Wang, Hui Shi, Chenhui Yang, Yiqun Gu, Jianyuan Li, Zhiliang Ji |
SperMD: the expression atlas of sperm maturation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Daniel Skubleny, Sunita Ghosh, Jennifer Spratlin, Daniel E. Schiller, Gina R. Rayat |
Feature-specific quantile normalization and feature-specific mean-variance normalization deliver robust bi-directional classification and feature selection performance between microarray and RNAseq data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Audrey E. Bollas, Andrei Rajkovic, Defne Ceyhan, Jeffrey B. Gaither, Elaine R. Mardis, Peter White |
SNVstory: inferring genetic ancestry from genome sequencing data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Simone Alessandri, Maria L. Ratto, Sergio Rabellino, Gabriele Piacenti, Sandro Gepiro Contaldo, Simone Pernice, Marco Beccuti, Raffaele A. Calogero, Luca Alessandrì |
CREDO: a friendly Customizable, REproducible, DOcker file generator for bioinformatics applications. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | K. M. Tahsin Hassan Rahit, Vladimir Avramovic, Jessica X. Chong, Maja Tarailo-Graovac |
GPAD: a natural language processing-based application to extract the gene-disease association discovery information from OMIM. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Benjamin Giovanni Iovino, Yuzhen Ye |
Protein embedding based alignment. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | David L. Hölscher, Michael Goedertier, Barbara Mara Klinkhammer, Patrick Droste, Ivan G. Costa, Peter Boor, Roman David Bülow |
tRigon: an R package and Shiny App for integrative (path-)omics data analysis. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Moein E. Samadi, Hedieh Mirzaieazar, Alexander Mitsos, Andreas Schuppert |
Noisecut: a python package for noise-tolerant classification of binary data using prior knowledge integration and max-cut solutions. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Katharina Munk, Daria Ilina, Lisa Ziemba, Günter Brader, Eva M. Molin |
Holomics - a user-friendly R shiny application for multi-omics data integration and analysis. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Katelyn McNair, Peter Salamon, Robert A. Edwards, Anca M. Segall |
PRFect: a tool to predict programmed ribosomal frameshifts in prokaryotic and viral genomes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Bingjun Li, Sheida Nabavi |
A multimodal graph neural network framework for cancer molecular subtype classification. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Haiyue Kuang, Zhen Zhang, Bin Zeng, Xin Liu, Hao Zuo, Xingye Xu, Lei Wang |
A novel microbe-drug association prediction model based on graph attention networks and bilayer random forest. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Rogia Kpanou, Patrick Dallaire, Elsa Rousseau, Jacques Corbeil |
Learning self-supervised molecular representations for drug-drug interaction prediction. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Caleb K. Kibet, Jean-Baka Domelevo Entfellner, Daudi Jjingo, Etienne Pierre de Villiers, Santie de Villiers, Karen Wambui, Sam Kinyanjui, Daniel Masiga |
Designing and delivering bioinformatics project-based learning in East Africa. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Karen Sargsyan, Carmay Lim |
Using protein language models for protein interaction hot spot prediction with limited data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Thi-Hau Nguyen, Ha-Nam Nguyen, Trung-Nghia Vu |
CircNetVis: an interactive web application for visualizing interaction networks of circular RNAs. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lasse Meyer, Nils Eling, Bernd Bodenmiller |
cytoviewer: an R/Bioconductor package for interactive visualization and exploration of highly multiplexed imaging data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaolu Xu, Zitong Qi, Lei Wang, Meiwei Zhang, Zhaohong Geng, Xiumei Han |
Gsw-fi: a GLM model incorporating shrinkage and double-weighted strategies for identifying cancer driver genes with functional impact. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Ying Liang, XingRui Yin, YangSen Zhang, You Guo, YingLong Wang |
Predicting lncRNA-protein interactions through deep learning framework employing multiple features and random forest algorithm. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Josip Maric, Kresimir Krizanovic, Sylvain Riondet, Niranjan Nagarajan, Mile Sikic |
Comparative analysis of metagenomic classifiers for long-read sequencing datasets. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Philippe Hauchamps, Babak Bayat, Simon Delandre, Mehdi Hamrouni, Marie Toussaint, Stephane Temmerman, Dan Lin, Laurent Gatto |
CytoPipeline and CytoPipelineGUI: a Bioconductor R package suite for building and visualizing automated pre-processing pipelines for flow cytometry data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Thanh Hai Dang, Tien Anh Vu |
xCAPT5: protein-protein interaction prediction using deep and wide multi-kernel pooling convolutional neural networks with protein language model. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Clayton Carter, Aaron Saporito, Stephen M. Douglass |
MetageneCluster: a Python package for filtering conflicting signal trends in metagene plots. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Ka Yin Chin, Shoichi Ishida, Yukio Sasaki, Kei Terayama |
Predicting condensate formation of protein and RNA under various environmental conditions. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Ahmed M. A. Elsherbini, Amr Hassan Elkholy, Youssef M. Fadel, Gleb Goussarov, Ahmed Mohamed Elshal, Mohamed El-Hadidi, Mohamed Mysara |
Utilizing genomic signatures to gain insights into the dynamics of SARS-CoV-2 through Machine and Deep Learning techniques. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Emma E. Kim, Chloe Soohyun Jang, Hakin Kim, Buhm Han |
PASTRY: achieving balanced power for detecting risk and protective minor alleles in meta-analysis of association studies with overlapping subjects. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Shangru Li, Xiangpeng Meng, Rui Li, Bingding Huang, Xin Wang |
NanoBERTa-ASP: predicting nanobody paratope based on a pretrained RoBERTa model. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Andrew Zheng, Jim Shaw, Yun William Yu |
Mora: abundance aware metagenomic read re-assignment for disentangling similar strains. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Claus Vogl, Mariia Karapetiants, Burçin Yildirim, Hrönn Kjartansdóttir, Carolin Kosiol, Juraj Bergman, Michal Majka, Lynette Caitlin Mikula |
Inference of genomic landscapes using ordered Hidden Markov Models with emission densities (oHMMed). |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Benedikt Venn, Thomas Leifeld, Ping Zhang 0022, Timo Mühlhaus |
Temporal classification of short time series data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Honglei Wang, Tao Huang, Dong Wang, Wenliang Zeng, Yanjing Sun, Lin Zhang 0015 |
MSCAN: multi-scale self- and cross-attention network for RNA methylation site prediction. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | J. Ludwig, Jan Mrázek |
OrthoRefine: automated enhancement of prior ortholog identification via synteny. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lifei Wang, Rui Nie, Xuexia Miao, Yankai Cai, Anqi Wang, Hanwen Zhang, Jiang Zhang 0006, Jun Cai |
InClust+: the deep generative framework with mask modules for multimodal data integration, imputation, and cross-modal generation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jorge Beltrán, Lisandra Herrera Belén, Fernanda Parraguez Contreras, Jorge G. Farias, Jorge Machuca-Sepúlveda, Stefania Short |
MultiToxPred 1.0: a novel comprehensive tool for predicting 27 classes of protein toxins using an ensemble machine learning approach. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jesse R. Walsh, Guangchao Sun, Jagadheshwar Balan, Jayson Hardcastle, Jason Vollenweider, Calvin Jerde, Kandelaria Rumilla, Christy Koellner, Alaa Koleilat, Linda Hasadsri, Benjamin Kipp, W. Garrett Jenkinson, Eric W. Klee |
A supervised learning method for classifying methylation disorders. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Wei Han, Sanguo Zhang, Hailong Gao, Deliang Bu |
Clustering on hierarchical heterogeneous data with prior pairwise relationships. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Steven Gore, Bailey Meche, Danyang Shao, Benjamin Ginnett, Kelly Zhou, Rajeev K. Azad |
DiseaseNet: a transfer learning approach to noncommunicable disease classification. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Xu Zhang, Ya Su, Andrew N. Lane, Arnold J. Stromberg, Teresa W.-M. Fan, Chi Wang 0003 |
Correction: Bayesian kinetic modeling for tracer-based metabolomic data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | H. M. A. Mohit Chowdhury, Terrance E. Boult, Oluwatosin Oluwadare |
Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Sagara N. S. Gurusinghe, Julia M. Shifman |
Cold Spot SCANNER: Colab Notebook for predicting cold spots in protein-protein interfaces. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Edwin Alvarez-Mamani, Reinhard Dechant, César Armando Beltrán Castañón, Alfredo J. Ibáñez |
Graph embedding on mass spectrometry- and sequencing-based biomedical data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Dengju Yao, Bailin Li, Xiaojuan Zhan, Xiaorong Zhan, Liyang Yu |
GCNFORMER: graph convolutional network and transformer for predicting lncRNA-disease associations. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Rose-Marie Fraboulet, Yanis Si Ahmed, Marc Aubry, Sebastien Corre, Marie-Dominique Galibert, Yuna Blum |
Cirscan: a shiny application to identify differentially active sponge mechanisms and visualize circRNA-miRNA-mRNA networks. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Rafael Peres da Silva, Chayaporn Suphavilai, Niranjan Nagarajan |
MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and missing genomes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Sheikh Hasib Ahmed, Dibyendu Brinto Bose, Rafi Khandoker, M. Saifur Rahman |
StackDPP: a stacking ensemble based DNA-binding protein prediction model. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Clémence Joseph, Haris Zafeiropoulos, Kristel Bernaerts, Karoline Faust |
Predicting microbial interactions with approaches based on flux balance analysis: an evaluation. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Donny Chan, Graham L. Cromar, Billy Taj, John Parkinson |
Cell4D: a general purpose spatial stochastic simulator for cellular pathways. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Mahmoud Gamal, Marwa A. Ibrahim |
Introducing the f0% method: a reliable and accurate approach for qPCR analysis. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Tay Xin Hui, Shahreen Kasim, Izzatdin Abdul Aziz, Mohd Farhan Md Fudzee, Nazleeni Samiha Haron, Tole Sutikno, Rohayanti Hassan, Hairulnizam Mahdin, Seah Choon Sen |
Robustness evaluations of pathway activity inference methods on gene expression data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Abigail Glascock, Eric Waltari, Gytis Dudas, Joan Wong, Vida Ahyong |
PoMeLo: a systematic computational approach to predicting metabolic loss in pathogen genomes. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Neda Emami, Reza Ferdousi |
HormoNet: a deep learning approach for hormone-drug interaction prediction. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Tianhua Yao, Xicheng Chen, Haojia Wang, Chengcheng Gao, Jia Chen, Dali Yi, Zeliang Wei, Ning Yao, Yang Li, Dong Yi, Yazhou Wu |
Deep evolutionary fusion neural network: a new prediction standard for infectious disease incidence rates. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael A. Reiter, Julia A. Vorholt |
Dashing Growth Curves: a web application for rapid and interactive analysis of microbial growth curves. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Akram Ashyani, Yu-Heng Wu, Huan-Wei Hsu, Torbjörn E. M. Nordling |
Ideal adaptive control in biological systems: an analysis of $\mathbb {P}$-invariance and dynamical compensation properties. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Milad Eidi, Samaneh Abdolalizadeh, Soheila Moeini, Masoud Garshasbi, Javad Zahiri |
123VCF: an intuitive and efficient tool for filtering VCF files. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Seungjun Ahn, Somnath Datta |
Differential network connectivity analysis for microbiome data adjusted for clinical covariates using jackknife pseudo-values. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yongwen Zhuang, Na Yeon Kim, Lars G. Fritsche, Bhramar Mukherjee, Seunggeun Lee |
Incorporating functional annotation with bilevel continuous shrinkage for polygenic risk prediction. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | David Rojas-Velazquez, Sarah Kidwai, Aletta D. Kraneveld, Alberto Tonda, Daniel L. Oberski, Johan Garssen, Alejandro Lopez Rincon |
Methodology for biomarker discovery with reproducibility in microbiome data using machine learning. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Theresa Scharl, Bettina Grün |
A clustering procedure for three-way RNA sequencing data using data transformations and matrix-variate Gaussian mixture models. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Sedighe Rastaghi, Azadeh Saki, Hamed Tabesh |
Correction: Modifying the false discovery rate procedure based on the information theory under arbitrary correlation structure and its performance in high-dimensional genomic data. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jing Chen, Haoyu Wu, Ning Wang |
KEGG orthology prediction of bacterial proteins using natural language processing. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Ali Hakem Alsaeedi, Haider Hameed R. Al-Mahmood, Zainab Fahad Alnaseri, Mohammad R. Aziz, Dhiah Al-Shammary, Ayman Ibaida, Khandakar Ahmed |
Fractal feature selection model for enhancing high-dimensional biological problems. |
BMC Bioinform. |
2024 |
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| 1 | Joel Nulsen, Nosheen Hussain, Aws Al-Deka, Jason Yap, Khalil Uddin, Christopher Yau, Ahmed Ashour Ahmed |
Correction: Completing a genomic characterisation of microscopic tumour samples with copy number. |
BMC Bioinform. |
2024 |
DBLP DOI BibTeX RDF |
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