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Found 10303 publication records. Showing 10303 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Kameel Khabaz, Karen Yuan, Joseph Pugar, David Jiang, Seth Sankary, Sanjeev Dhara, Junsung Kim, Janet Kang, Nhung Nguyen, Kathleen Cao, Newell Washburn, Nicole Bohr, Cheong Jun Lee, Gordon Kindlmann, Ross Milner, Luka Pocivavsek |
The geometric evolution of aortic dissections: Predicting surgical success using fluctuations in integrated Gaussian curvature.  |
PLoS Comput. Biol.  |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jacob B. Roberts, Alberto A Nava, Allison N. Pearson, Matthew R. Incha, Luis E. Valencia, Melody Ma, Abhay Rao, Jay D. Keasling |
Foldy: An open-source web application for interactive protein structure analysis. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Haiqing Zhao, Hao Wu, Alex Guseman, Dulith Abeykoon, Christina M. Camara, Yamini Dalal, David Fushman, Garegin A. Papoian |
The role of cryptic ancestral symmetry in histone folding mechanisms across Eukarya and Archaea. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Said el Bouhaddani, Matthias Höllerhage, Hae-Won Uh, Claudia Moebius, Marc Bickle, Günter U. Höglinger, Jeanine J. Houwing-Duistermaat |
Statistical integration of multi-omics and drug screening data from cell lines. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sarah Percival, Joyce G. Onyenedum, Daniel H. Chitwood, Aman Y. Husbands |
Topological data analysis reveals core heteroblastic and ontogenetic programs embedded in leaves of grapevine (Vitaceae) and maracuyá (Passifloraceae). |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Eric Elmoznino, Michael F. Bonner |
High-performing neural network models of visual cortex benefit from high latent dimensionality. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Yoav Ger, Eliya Nachmani, Lior Wolf, Nitzan Shahar |
Harnessing the flexibility of neural networks to predict dynamic theoretical parameters underlying human choice behavior. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Kemin Zhu, Ling Yin, Kang Liu 0010, Junli Liu, Yepeng Shi, Xuan Li, Hongyang Zou, Huibin Du |
Generating synthetic population for simulating the spatiotemporal dynamics of epidemics. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Juliette Cooke, Maxime Delmas, Cecilia Wieder, Pablo Rodríguez-Mier, Clément Frainay, Florence Vinson, Timothy M. D. Ebbels, Nathalie Poupin, Fabien Jourdan |
Genome scale metabolic network modelling for metabolic profile predictions. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Li-Dunn Chen, Michael A. Caprio, Devin M. Chen, Andrew J. Kouba, Carrie K. Kouba |
Enhancing predictive performance for spectroscopic studies in wildlife science through a multi-model approach: A case study for species classification of live amphibians. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Connor R. King, Casey-Tyler Berezin, Jean Peccoud |
Stochastic model of vesicular stomatitis virus replication reveals mutational effects on virion production. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Eshan S. King, Dagim S. Tadele, Beck Pierce, Michael Hinczewski, Jacob G. Scott |
Diverse mutant selection windows shape spatial heterogeneity in evolving populations. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Raymond Copeland, Christopher Zhang, Brian K. Hammer, Peter J. Yunker |
Spatial constraints and stochastic seeding subvert microbial arms race. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Bryan Shin, Gary An, Chase Cockrell |
Examining B-cell dynamics and responsiveness in different inflammatory milieus using an agent-based model. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Dennis Eschweiler, Rüveyda Yilmaz, Matisse Baumann, Ina Laube, Rijo Roy, Abin Jose, Daniel Brückner, Johannes Stegmaier |
Denoising diffusion probabilistic models for generation of realistic fully-annotated microscopy image datasets. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lily Monnier, Paul-Henry Cournède |
A novel batch-effect correction method for scRNA-seq data based on Adversarial Information Factorization. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Martin Grunnill, Julien Arino, Zachary McCarthy, Nicola Luigi Bragazzi, Laurent Coudeville, Edward W. Thommes, Amine Amiche, Abbas Ghasemi, Lydia Bourouiba, Mohammadali Tofighi, Ali Asgary, Mortaza Baky-Haskuee, Jianhong Wu |
Modelling disease mitigation at mass gatherings: A case study of COVID-19 at the 2022 FIFA World Cup. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Gabriel Reuben Smith, Carolina Bello, Lalasia Bialic-Murphy, Emily Clark, Camille S. Delavaux, Camille Fournier de Lauriere, Johan van den Hoogen, Thomas Lauber, Haozhi Ma, Daniel S. Maynard, Matthew Mirman, Lidong Mo, Dominic Rebindaine, Josephine Elena Reek, Leland K. Werden, Zhaofei Wu, Gayoung Yang, Qingzhou Zhao, Constantin M. Zohner, Thomas Ward Crowther |
Ten simple rules for using large language models in science, version 1.0. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Luca Sesta, Andrea Pagnani, Jorge Fernandez-de-Cossío-Diaz, Guido Uguzzoni |
Inference of annealed protein fitness landscapes with AnnealDCA. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Mehran Fazli, Richard Bertram |
Conversion of spikers to bursters in pituitary cell networks: Is it better to disperse for maximum exposure or circle the wagons? |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Karan Kabbur Hanumanthappa Manjunatha, Giorgia Baron, Danilo Benozzo, Erica Silvestri, Maurizio Corbetta, Alessandro Chiuso, Alessandra Bertoldo, Samir Suweis, Michele Allegra |
Controlling target brain regions by optimal selection of input nodes. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Janne J. Luppi, Cornelis J. Stam, Philip Scheltens, Willem de Haan |
Virtual neural network-guided optimization of non-invasive brain stimulation in Alzheimer's disease. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Natalie Schieferstein, Tilo Schwalger, Benjamin Lindner, Richard Kempter |
Intra-ripple frequency accommodation in an inhibitory network model for hippocampal ripple oscillations. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Beatriz Ocaña-Tienda, Odelaisy León-Triana, Julián Pérez-Beteta, Juan Jiménez-Sánchez, Víctor M. Pérez-García |
Radiation necrosis after radiation therapy treatment of brain metastases: A computational approach. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jane Knöchel, Charlotte Kloft, Wilhelm Huisinga |
Index analysis: An approach to understand signal transduction with application to the EGFR signalling pathway. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Aakash Pandey, Abigail B. Feuka, Melinda Cosgrove, Megan Moriarty, Anthony Duffiney, Kurt C. Vercauteren, Henry Campa III, Kim M. Pepin |
Wildlife vaccination strategies for eliminating bovine tuberculosis in white-tailed deer populations. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Magdalena Kozielska, Franz J. Weissing |
A neural network model for the evolution of learning in changing environments. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Joe Hilton, Ian M. Hall |
A beta-Poisson model for infectious disease transmission. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Virginia Dominguez-Garcia, Sonia Kéfi |
The structure and robustness of ecological networks with two interaction types. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Marcus Kaiser |
Ten simple rules for establishing an experimental lab. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Joachim Goedhart |
Studentsourcing - Aggregating and reusing data from a practical cell biology course. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Helena Klara Jambor, Martin Bornhäuser |
Ten simple rules for designing graphical abstracts. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Shunsuke Koseki, Mitsuhiro Hayashibe, Dai Owaki |
Identifying essential factors for energy-efficient walking control across a wide range of velocities in reflex-based musculoskeletal systems. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Chin-Hsuan Sophie Lin, Trang Thuy Do, Lee Unsworth, Marta I. Garrido |
Are we really Bayesian? Probabilistic inference shows sub-optimal knowledge transfer. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Eduardo Jardón-Valadez, Alfredo Ulloa-Aguirre |
Tracking conformational transitions of the gonadotropin hormone receptors in a bilayer of (SDPC) poly-unsaturated lipids from all-atom molecular dynamics simulations. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Moritz Groden, Hannah M. Moessinger, Barbara Schaffran, Javier DeFelipe, Ruth Benavides-Piccione, Hermann Cuntz, Peter Jedlicka |
A biologically inspired repair mechanism for neuronal reconstructions with a focus on human dendrites. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yong-Jin Huang, Chun-Wei Chang, Chih-Hao Hsieh |
Detecting shifts in nonlinear dynamics using Empirical Dynamic Modeling with Nested-Library Analysis. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Enrique R. Sebastian, Julio Esparza, Liset M. De La Prida |
Quantifying the distribution of feature values over data represented in arbitrary dimensional spaces. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Paul Soulos, Leyla Isik |
Disentangled deep generative models reveal coding principles of the human face processing network. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Pablo Alvarez 0001, Marouane El Mouss, Maxime Calka, Anca Belme, Gilles Berillon, Pauline Brige, Yohan Payan, Pascal Perrier, Amélie Vialet |
Predicting primate tongue morphology based on geometrical skull matching. A first step towards an application on fossil hominins. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Jinchao Lv, Jin Wang, Chunhe Li |
Landscape quantifies the intermediate state and transition dynamics in ecological networks. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Yaojia Chen, Jiacheng Wang, Chunyu Wang, Quan Zou 0001 |
AutoEdge-CCP: A novel approach for predicting cancer-associated circRNAs and drugs based on automated edge embedding. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Javier Robles, Ananth Prakash, Juan Antonio Vizcaíno, J. Ignacio Casal |
Integrated meta-analysis of colorectal cancer public proteomic datasets for biomarker discovery and validation. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Paul F. Lang, David R. Penas, Julio R. Banga, Daniel Weindl, Béla Novák |
Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Martijn A. de Jong, Esmée Adegeest, Noémie M. L. P. Bérenger-Currias, Maria Mircea, Roeland M. H. Merks, Stefan Semrau |
The shapes of elongating gastruloids are consistent with convergent extension driven by a combination of active cell crawling and differential adhesion. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Aaron L. Phillips, Scott Ferguson, Rachel A. Burton, Nathan S. Watson-Haigh |
CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Takahiro Kohsokabe, Shigeru Kuratanai, Kunihiko Kaneko |
Developmental hourglass: Verification by numerical evolution and elucidation by dynamical-systems theory. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jian Zou, Osama Shah, Yu-Chiao Chiu, Tianzhou Ma, Jennifer M. Atkinson, Steffi Oesterreich, Adrian V. Lee, George C. Tseng |
Systems approach for congruence and selection of cancer models towards precision medicine. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Francesco Pinotti, José Lourenço, Sunetra Gupta, Suman Das Gupta, Joerg Henning, Damer Blake, Fiona Tomley, Tony Barnett, Dirk Pfeiffer, Md. Ahasanul Hoque, Guillaume Fournié |
EPINEST, an agent-based model to simulate epidemic dynamics in large-scale poultry production and distribution networks. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Meenal Datta, McCarthy Kennedy, Saeed Siri, Laura E. Via, James W. Baish, Lei Xu, Véronique Dartois, Clifton E. Barry 3rd, Rakesh K. Jain |
Mathematical model of oxygen, nutrient, and drug transport in tuberculosis granulomas. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Andrea Papale, David Holcman |
Chromatin phase separated nanoregions explored by polymer cross-linker models and reconstructed from single particle trajectories. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Leo Zeitler, Kévin André, Adriana Alberti, Cyril Denby Wilkes, Julie Soutourina, Arach Goldar |
A genome-wide comprehensive analysis of nucleosome positioning in yeast. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Bonnie V. Dougherty, Connor J. Moore, Kristopher D. Rawls, Matthew L. Jenior, Bryan Chun, Sarbajeet Nagdas, Jeffrey J. Saucerman, Glynis L. Kolling, Anders Wallqvist, Jason A. Papin |
Identifying metabolic adaptations characteristic of cardiotoxicity using paired transcriptomics and metabolomics data integrated with a computational model of heart metabolism. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Chen Beer, Omri Barak |
Revealing and reshaping attractor dynamics in large networks of cortical neurons. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Lucas Castillo, Pablo León-Villagrá, Nick Chater, Adam Sanborn |
Explaining the flaws in human random generation as local sampling with momentum. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jakub Köry, Vedang Narain, Bernadette J. Stolz, Jakob Kaeppler, Bostjan Markelc, Ruth J. Muschel, Philip K. Maini, Joe Pitt-Francis, Helen M. Byrne |
Enhanced perfusion following exposure to radiotherapy: A theoretical investigation. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Linxing Preston Jiang, Rajesh P. N. Rao |
Dynamic predictive coding: A model of hierarchical sequence learning and prediction in the neocortex. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Hong Seo Lim, Peng Qiu |
Quantifying the clusterness and trajectoriness of single-cell RNA-seq data. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jiao Zhao, Ke Chen, Bernhard O. Palsson, Laurence Yang 0001 |
StressME: Unified computing framework of Escherichia coli metabolism, gene expression, and stress responses. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Kaiser J. Loell, Ryan Z. Friedman, Connie A. Myers, Joseph C. Corbo, Barak A. Cohen, Michael A. White |
Transcription factor interactions explain the context-dependent activity of CRX binding sites. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | David L. Krongauz, Amir Ayali, Gal A. Kaminka |
Vision-based collective motion: A locust-inspired reductionist model. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Xiang Liu, Nancy Gillis, Chang Jiang, Anthony McCofie, Timothy I. Shaw, Aik Choon Tan, Bo Zhao, Lixin Wan, Derek R. Duckett, Mingxiang Teng |
An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Rituparna Samanta, Jeffrey J. Gray |
Implicit model to capture electrostatic features of membrane environment. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Ata Kalirad, Ralf J. Sommer |
Spatial and temporal heterogeneity alter the cost of plasticity in Pristionchus pacificus. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Chen Zhang, Junhui Gao, Hong-Yu Chen, Lingxin Kong, Guangshuo Cao, Xiangyu Guo, Wei Liu, Bin Ren, Dong-Qing Wei |
STGIC: A graph and image convolution-based method for spatial transcriptomic clustering. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Denise Vlachou, Maria Veretennikova, Laura Usselmann, Vadim Vasilyev, Sascha Ott, Georg A. Bjarnason, Robert Dallmann, Francis Levi, David A. Rand |
TimeTeller: A tool to probe the circadian clock as a multigene dynamical system. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Alexander Borst |
Connectivity Matrix Seriation via Relaxation. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Alexander D. Bird, Hermann Cuntz, Peter Jedlicka |
Robust and consistent measures of pattern separation based on information theory and demonstrated in the dentate gyrus. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Keith E. Kennedy, Nicole Kerlero de Rosbo, Antonio Uccelli, Maria Cellerino, Federico Ivaldi, Paola Contini, Raffaele De Palma, Hanne F. Harbo, Tone Berge, Steffan D. Bos, Einar A. Høgestøl, Synne Brune-Ingebretsen, Sigrid A. de Rodez Benavent, Friedemann Paul, Alexander U. Brandt, Priscilla Bäcker-Koduah, Janina Behrens, Joseph Kuchling, Susanna Asseyer, Michael Scheel, Claudia Chien, Hanna Zimmermann, Seyedamirhosein Motamedi, Josef Kauer-Bonin, Julio Saez-Rodriguez, Melanie Rinas, Leonidas G. Alexopoulos, Magi Andorra, Sara Llufriu, Albert Saiz, Yolanda Blanco, Eloy Martinez-Heras, Elisabeth Solana, Irene Pulido-Valdeolivas, Elena H. Martinez-Lapiscina, Jordi García-Ojalvo, Pablo Villoslada |
Multiscale networks in multiple sclerosis. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Hua-Chang Chen, Jing Wang, Yu Shyr, Qi Liu 0024 |
FindAdapt: A python package for fast and accurate adapter detection in small RNA sequencing. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sjoerd Terpstra, Flavia Maria Darcie Marquitti, Vítor V. Vasconcelos |
Adaptive foraging of pollinators fosters gradual tipping under resource competition and rapid environmental change. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sarvenaz Sarabipour, Karina Kinghorn, Kaitlyn M. Quigley, Anita Kovacs-Kasa, Brian H. Annex, Victoria L. Bautch, Feilim Mac Gabhann |
Trafficking dynamics of VEGFR1, VEGFR2, and NRP1 in human endothelial cells. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng 0005 |
magpie: A power evaluation method for differential RNA methylation analysis in N6-methyladenosine sequencing. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sizhe Qiu, Xinlong Wan, Yueshan Liang, Cameron R. Lamoureux, Amir Akbari, Bernhard O. Palsson, Daniel C. Zielinski |
Inferred regulons are consistent with regulator binding sequences in E. coli. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Tijl Grootswagers, Amanda K. Robinson, Sophia M. Shatek, Thomas A. Carlson |
Mapping the dynamics of visual feature coding: Insights into perception and integration. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sangjeong Lee, Hyunwoo Kim 0003 |
Bidirectional de novo peptide sequencing using a transformer model. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Daniele Dall'Olio, Eric Sträng, Amin T. Turki, Jesse M. Tettero, Martje Barbus, Renate Schulze-Rath, Javier Martinez Elicegui, Tommaso Matteuzzi, Alessandra Merlotti, Luciana Carota, Claudia Sala, Matteo G. Della Porta, Enrico Giampieri, Jesús María Hernández-Rivas, Lars Bullinger, Gastone C. Castellani |
Covering Hierarchical Dirichlet Mixture Models on binary data to enhance genomic stratifications in onco-hematology. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Bastiaan J. R. Cockx, Tim Foster, Robert J. Clegg, Kieran Alden, Sankalp Arya, Dov J. Stekel, Barth F. Smets, Jan-Ulrich Kreft |
Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Alice Bruel, Ignacio Abadía, Thibault Collin, Icare Sakr, Henri Lorach, Niceto R. Luque, Eduardo Ros 0001, Auke Jan Ijspeert |
The spinal cord facilitates cerebellar upper limb motor learning and control; inputs from neuromusculoskeletal simulation. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Yongtao Ye, Marcus H. Shum, Joseph L. Tsui, Guangchuang Yu, David K. Smith, Huachen Zhu, Joseph T. Wu, Yi Guan, Tommy Tsan-Yuk Lam |
Robust expansion of phylogeny for fast-growing genome sequence data. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Sebastian Himbert, Dorian Gaboo, Emre Brookes, John F. Nagle, Maikel C. Rheinstädter |
MEDUSA: A cloud-based tool for the analysis of X-ray diffuse scattering to obtain the bending modulus from oriented membrane stacks. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Avik Mukherjee, Yu-Fang Chang, Yanqing Huang, Nina Catherine Benites, Leander Ammar, Jade Ealy, Mark Polk, Markus Basan |
Plasticity of growth laws tunes resource allocation strategies in bacteria. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Jiarui Feng, S. Peter Goedegebuure, Amanda Zeng, Ye Bi, Ting Wang, Philip R. O. Payne, Li Ding, David DeNardo, William Hawkins, Ryan C. Fields, Fuhai Li |
sc2MeNetDrug: A computational tool to uncover inter-cell signaling targets and identify relevant drugs based on single cell RNA-seq data. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Kieran D. Lamb, Martha M. Luka, Megan Saathoff, Richard J. Orton, My V. T. Phan, Matthew Cotten, Ke Yuan, David L. Robertson |
Mutational signature dynamics indicate SARS-CoV-2's evolutionary capacity is driven by host antiviral molecules. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Yu Feng 0004, Nicolas Brunel |
Attractor neural networks with double well synapses. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Pascal P. Klamser, Adrian Zachariae, Benjamin F. Maier, Olga Baranov, Clara Jongen, Frank Schlosser, Dirk Brockmann |
Inferring country-specific import risk of diseases from the world air transportation network. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Josepha Godivier, Elizabeth A. Lawrence, Mengdi Wang, Chrissy L. Hammond, Niamh C. Nowlan |
Compressive stress gradients direct mechanoregulation of anisotropic growth in the zebrafish jaw joint. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | R. Dustin Schaeffer, Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin |
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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| 1 | Paul J. N. Brodersen, Hannah Alfonsa, Lukas B. Krone, Cristina Blanco-Duque, Angus S. Fisk, Sarah J. Flaherty, Mathilde C. C. Guillaumin, Yi-Ge Huang, Martin C. Kahn, Laura E. McKillop, Linus Milinski, Lewis Taylor, Christopher W. Thomas, Tomoko Yamagata, Russell G. Foster, Vladyslav V. Vyazovskiy, Colin J. Akerman |
Somnotate: A probabilistic sleep stage classifier for studying vigilance state transitions. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Ian T. Ellwood |
Short-term Hebbian learning can implement transformer-like attention. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Tyson L. Swetnam, Parker B. Antin, Ryan Bartelme, Alexander Bucksch, David Camhy, Greg Chism, Illyoung Choi, Amanda M. Cooksey, Michele Cosi, Cindy Cowen, Michael Culshaw-Maurer, Robert Davey, Sean Davey, Upendra Devisetty, Tony Edgin, Andy Edmonds, Dmitry V. Fedorov, Jeremy Frady, John Fonner, Jeffrey K. Gillan, Iqbal Hossain 0001, Blake Joyce, Konrad Lang, Tina Lee, Shelley Littin, Ian McEwen, Nirav C. Merchant, David Micklos, Andrew Nelson, Ashley Ramsey, Sarah Roberts, Paul Sarando, Edwin Skidmore, Jawon Song, Mary Margaret Sprinkle, Sriram Srinivasan, Dan Stanzione, Jonathan D. Strootman, Sarah Stryeck, Reetu Tuteja, Matthew Vaughn, Mojib Wali, Mariah Wall, Ramona Walls, Liya Wang, Todd Wickizer, Jason Williams, John Wregglesworth, Eric Lyons 0002 |
CyVerse: Cyberinfrastructure for open science. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Samuel H. A. von der Dunk, Paulien Hogeweg, Berend Snel |
Intracellular signaling in proto-eukaryotes evolves to alleviate regulatory conflicts of endosymbiosis. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | András Zeke, Toby J. Gibson, Laszlo Dobson |
Linear motifs regulating protein secretion, sorting and autophagy in Leishmania parasites are diverged with respect to their host equivalents. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Hong An, J. Chris Pires, Gavin C. Conant |
Gene expression bias between the subgenomes of allopolyploid hybrids is an emergent property of the kinetics of expression. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Tom Van Wouwe, Jennifer L. Hicks, Scott L. Delp, Karen C. Liu |
A simulation framework to determine optimal strength training and musculoskeletal geometry for sprinting and distance running. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Pan Li, Jae Kyoung Kim |
Circadian regulation of sinoatrial nodal cell pacemaking function: Dissecting the roles of autonomic control, body temperature, and local circadian rhythmicity. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Sven Wientjes, Clay B. Holroyd |
The successor representation subserves hierarchical abstraction for goal-directed behavior. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Carlos S. N. Brito, Wulfram Gerstner |
Learning what matters: Synaptic plasticity with invariance to second-order input correlations. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Quintessa Hay, Christopher Grubb, Sarah Minucci, Michael S. Valentine, Jennifer Van Mullekom, Rebecca L. Heise, Angela M. Reynolds |
Age-dependent ventilator-induced lung injury: Mathematical modeling, experimental data, and statistical analysis. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Michiel van Boven, Christiaan H. van Dorp, Ilse Westerhof, Vincent Jaddoe, Valerie Heuvelman, Liesbeth Duijts, Elandri Fourie, Judith Sluiter-Post, Marlies A. van Houten, Paul Badoux, Sjoerd Euser, Bjorn Herpers, Dirk Eggink, Marieke de Hoog, Trisja Boom, Joanne Wildenbeest, Louis Bont, Ganna Rozhnova, Marc J. M. Bonten, Mirjam E. Kretzschmar, Patricia Bruijning-Verhagen |
Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
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